synteny


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synteny

 [sin´tĕ-ne]
the presence together on the same chromosome of two or more gene loci whether or not in such proximity that they may be subject to linkage. adj., adj synten´ic.

syn·te·ny

(sin'te-nē),
The relationship between two genetic loci (not genes) represented on the same chromosomal pair or (for haploid chromosomes) on the same chromosome; an anatomic rather than a segregational relationship.
[syn- + G. tainia, ribbon]

synteny

(sĭn′tə-nē)
n.
The condition of two or more genes being located on the same chromosome whether or not there is demonstrable linkage between them.

syn·ten′ic (-tĕn′ĭk) adj.

syn·te·ny

(sin'tĕ-nē)
The relationship between two genetic loci (not genes) represented on the same chromosomal pair or (for haploid chromosomes) on the same chromosome; an anatomic rather than a segregational relationship.
[syn- + G. tainia, ribbon]

synteny

two or more LOCI that lie on the same CHROMOSOME are syntenic (literally on the same ribbon). Correlation of the presence or absence of each of a set of chromosomes with the presence or absence of specific gene products is synteny testing.
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References in periodicals archive ?
Synteny analysis and functional characterization of miR165a from Brassica species.
A second generation integrated map of the rainbow trout (Oncorhynchus mykiss) genome: analysis of conserved synteny with model fish genomes.
Most QTL identified in mice have conserved synteny with human loci that control plasma lipid concentrations and diseases [5].
Yoshie, "Systematic classification of vertebrate chemokines based on conserved synteny and evolutionary history," Genes to Cells, vol.
According to the gene synteny with mammals, the predicted chicken IFITM3-like (GenBank: XM_420925) and chicken IFITM1-like (GenBank: XM_001233949) were renamed chicken IFITM1 and IFITM3, respectively.
Several features make zebrafish an attractive model for immunotoxicology studies, including high fecundity, embryonic and larval transparency, amenability to genetic manipulation (Kim and Tanguay, 2013), and a sequenced and annotated genome exhibiting large regions of conserved synteny with humans (Catchen et al., 2011).
Genetic and physical mapping of the chicken IGF-I gene to chromosome 1 and conservation of synteny with other vertebrate genomes.
Synteny in regions from four major QTLs associated with the stay-green character in sorghum were found on the rice genome, indicating the possibility of implementation of markers associated with this trait among members of the Poaceae.
I will combine physical mapping approaches (molecular cytogenetic and optical mapping) and sequence analysis to characterize and compare genomic collinearity (synteny) between genomes of Brassicaceae, Cleomaceae and Solanaceae species.
The tomato genome sequence, published a year later than the potato sequence, confirmed remarkable synteny with the potato genome (8.7 % sequence divergence between homologous euchromatic regions) with nine large and several smaller inversions (The Tomato Genome Consortium, 2012), providing evolutionary data relating to these two sister clades.
Conserved synteny of genes between chromosome 15 of Bombyx mori and a chromosome of Manduca sexta shown by five-color BAc-FISH.