2007 AFLP, amplified fragment length polymorphism; RFLP, restriction fragment length polymorphism; RAPD, Random amplified polymorphic DNA; SSR, single sequence repeats; SNP, single nucleotide polymorphism; EST, Expresses sequence tag; ISSR, Intersimple sequence repeats; REP-PCR, repetitive extragenic
palindromic PCR; ITS, internal transcribed spacer.
2009a), repetitive extragenic
palindromic-polymerase chain reaction (REP-PCR) (Versalovic et al.
Dos de estas secuencias se aplicaron en este trabajo, llamadas ERIC (enterobacterial repetitive intergenic consensus) y secuencias REP (repetitive extragenic
palindromic), las que han sido usadas ampliamente en tipificacion, analisis genetico e identificacion de brotes infecciosos bacterianos (Rademarker et al.
Pasanen T, Kotila SM, Horsma J, Virolainen A, Jalava J, Ibrahem S, Antikainen J, Mero S, Tarkka E, Vaara M et al: Comparison of repetitive extragenic
palindromic sequence-based PCR with PCR ribotyping and pulsed-field gel electrophoresis in studying the clonality of Clostridium difficile.
Specificity of enterobacterial repetitive intergenic consensus and repetitive extragenic
palindromic polymerase chain reaction for the detection of clonality within the Enterobacter cloacae complex.
These strains were identified to the species level by recA gene sequence comparisons (3) and analyzed for genomic relatedness by both degenerate oligonucleotide-primed PCR (4) and repetitive extragenic
Using human mammary epithelial cells, Emerson and Michal Krawczyk, a senior scientist in Salk's Regulatory Biology Laboratory, discovered that an lncRNA called PACER (p50-associated COX-2 extragenic
RNA) teams up with molecules that change the activity of the COX-2 gene.
Comparison of the alpha-toxin genes of Clostridium perfringens type A and C strains: evidence for extragenic
regulation of transcription.
Comparison of repetitive extragenic
palindromic sequence-based PCR clinical and microbiological methods for determining strain sources in cases of nosocomial Acinetobacter baumannii bacterermia.
Molecular characterizationof oxacillinases and genotyping of invasive Acinetobacterbaumannii isolates using repetitive extragenic
palindromicsequence-based polymerase chain reaction in Ankarabetween 2004 and 2010.
parahaemolyticus isolated from Rhode Island oyster and water samples was compared with pandemic and clinical strains using repetitive extragenic
palindromic polymerase chain reaction.
Bacterial repetitive extragenic
palindromic sequences are DNA targets for insertion sequence elements.