However, it has been suggested that the consensus sequence
of the ATF6[alpha] binding site in its UPRE is not for ATF6[alpha] but for XBP1 .
We originally used the 90% consensus sequence
as a reference genome for mapping sequencing reads, but we later refined this reference to a more appropriate reference genome (GenBank accession no.
Highlighter plot traces mismatched mutations as compared to the Asian/American consensus sequence
. Silent (n=1) and non-silent mutations (n = 5) are in 4 positions of the gene.
(@) Number of hits: *, 1-10; **, 11-99; ***, 100-1000; ***, 1000-3500; Sp1 consensus sequence
5'-(G/T)GGGCGG(G/A)(G/A)(C/T)-3' is underlined; G-runs are highlighted by red color.
The consensus sequence
did not match the IS6110 reference sequence or any other part of the M.
Generation of full-length class I human leukocyte antigen gene consensus sequences
for novel allele character ization [published online ahead of print September 27, 2016].
A Chr 1 consensus sequence
was constructed for each strain using the SNP information from MGP.
The Omixon Twin software as well as our implemented custom downstream analytical framework addresses this growing gap, allowing full-length gene read phasing, consensus sequence
generation and the characterization of novel class I HLA alleles.
Chromatograms obtained by sequencing were analyzed, and consensus sequences
were assembled using 4 sStaden package programs (STADEN et al., 2000).
Moreover, it will be worthwhile to detect the expression of the FAMLF alternative-splicing transcript consensus sequence
(FAMLF-CS; 1-363 bp) to evaluate the possible functional involvement of the gene in AL.
with sequences obtained Samples Primer Access number T.pretiosum ITS-2- R DQ525178.1 T.
** Number of cluster means number of organisms identified with the same consensus sequence