Genome-wide genotyping, haplotyping, and fine mapping linked renal Hg accumulation to three genes with identical LOD scores
vannamei nonLTR retrotransposons such as reverse transcriptase on to ShrimpMap using CRIMAP with LOD score
Dyslexia and chromosome 15 heteromorphism: negative LOD score
in a Danish material.
Table 2 shows these markers, their probabilities and LOD scores
, the group-wise threshold LOD scores
and the percentage of P.
For each locus tested, the parameter set giving the highest LOD score
was used to estimate additive and dominance effects in the lines per se and additive effects in the testcross lines.
LOD] is the number of trios in which the true sire was identified by assigning paternity to the putative sire with the highest LOD score
among non-excluded putative sires.
We recorded the highest peak observed for each chromosome and counted the number of chromosomes exhibiting an LOD score
equal to or greater than a given threshold p.
These same critical values were used for the LOD scores
generated from the mandibular characters as well, so that if the LOD score
for any character equaled or exceeded the critical value for that particular chromosome, the null hypothesis of no QTL effect was rejected.
Pairwise two-point lod scores
between [alpha]-LA and three markers Locus 1 Locus 2 Lod score
IL-TX RH5000 (1) [alpha]-LA U63110 8.
The Kosambi mapping function was used with a minimum LOD score
The mapping program JoinMap was chosen to construct partial LGs based on a minimum LOD score
of 4 (Stam, 1993; van Ooijen and Voorrips, 2001).
Any location with a LOD score
greater than the empirical LOD threshold level was considered to identify QTL significantly associated with the trait.