Genogroup

Genogroup

Related viruses within a genus; may be further subdivided into genetic clusters.
Mentioned in: Noroviruses
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References in periodicals archive ?
Evolutionary trajectory of the VP1 gene of human enterovirus 71 genogroup B and C viruses.
CTX-M genogroup1 was found to be the dominant group of CTX-M ESBLs in this study, which has also been reported as a common genogroup in clinical isolates from other parts of India (26,28).
Gharbi-Khelifi et al., "Molecular detection of genogroup I sapovirus in Tunisian children suffering from acute gastroenteritis," Virus Genes, vol.
Real-time PCR results from the vomitus specimen detected norovirus genogroup I.
The company added ARIES Norovirus Assay is an easy to use, sample to answer test for rapid detection and differentiation of norovirus genogroup I and II from stool specimens of individuals with symptoms of acute gastroenteritis.
The described genus specific assay could be applied for the primary detection of PBV infection in animals and, in combination with the genogroup specific PCRs, for the confirmation of new and emerging PBVs in animals.
Molecular detection of Ehrlichia phagocytophila genogroup organisms in larvae of Neotrombicula autumnalis (Acari: Trombiculidae) captured in Spain.
Noroviruses are classified into at least 6 genogroups (GI-GVI) with a tentative genogroup VII based on the sequence diversity of the RdRP and capsid regions of the genome [3].
An approach for genogrouping of japanese isolates of aquabirnaviruses in a new genogroup, VII, based on the VP2/NS junction region.
In order to estimate [P.sub.(k)] and [P'.sub.(k)] were established the following three genogroups according to the i constructed haplotypes for a particular HLA-A -B -DRB1: genogroup 1 is defined when i = 1 and this is given by the sum of the frequencies of each HLA-A, -B and -DRB1 alleles; genogroup 2 is defined when i = 2 and this is given by the sum of the frequencies of the HLA-A-B, HLA-B-D RB1 and HLA-A-DRB1 haplotypes; and genogroup 3 is defined when i = 3 and this is given by the frequency of the extended haplotype HLA-A-B-DRB1.
Of confirmed norovirus outbreaks, a genogroup was identified in 2,729 (92%), including 2,341 (86%) GII, 374 (14%) GI, 13 (0.5%) mixed GI/GII, and one (0.04%) GIV A specific norovirus genotype was reported in 707 (24%) of the laboratory-confirmed outbreaks, among which GII.4 (465 [66%]) was predominant, followed by GII.1 (58 [8%]) and GI.6 (56 [8%]).
Genogroup I picobimaviruses in pigs: evidence for genetic diversity and relatedness to human strains.