For example, the genera Streptococcus, Prevotella, Ruminococcus, Roseburia, Anaerococcus
, Butyricicoccus, Blautia, Escherichia, Faecalibacterium, and Oribacterium were more abundant in Hampshire pig fecal microbiota.
To identify the microbes responsible for TMA generation, the microbial species localized to the human intestinal tract were cultured with choline in vitro ; Anaerococcus
hydrogenalis, Clostridium asparagiforme, Clostridium hathewayi, Clostridium sporogenes, Escherichia fergusonii, Proteus penneri, Providencia rettgeri, and Edwardsiella tarda consumed choline and generated TMA.
A total of 95 anaerobic isolates were identified, including gram-positive cocci (predominantly Anaerococcus spp.
In chronic suppurating lesions, anaerobic species (Prevotella, Porphyromonas, Anaerococcus, and Mobiluncus spp.
The RT-RPA assay did not detect the genomic DNA of the 13 following bacteria: Lactococcus lactis, Streptococcus pyogenes, Bifidobacterium breve, Anaerococcus
lactolyticus, Acinetobacter baumannii, Bordetella pertussis, Bacteroides fragilis, Mobiluncus mulieris, Mobiluncus curtisii subsp.